Domain ID e4idpB3

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GBP
UID: 001303305
Type: Automatic domain
Parent: e4idnB1
Range: B:31-333
Ligands: GNP MG
PDB: 4idp
PDB Description: ATLASTIN-1
UniProt: Q8WXF7
Hsap BLAST neighbor: Q8WXF7
Species: Homo sapiens

Structure of domain e4idpB3

Domains in the same chain:

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e4idpB3 B:31-333 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4idpB1 B:345-446 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain

Domains in the same PDB:

e4idpA3 A:31-333 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4idpA2 A:345-446 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e4idpB3 B:31-333 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4idpB1 B:345-446 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e4idpC3 C:31-333 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4idpC1 C:345-446 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e4idpD3 D:30-334 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4idpD2 D:345-446 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain

Structural contacts of domain e4idpB3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4idpA2 B:x,y,z->A:X,Y,Z Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interaction Interface Pymol
e4idpA3 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4idpC1 B:x,y,z->C:X,Y,Z-1 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interaction Interface Pymol
e4idpD3 B:x,y,z->D:-X-1,-Y,Z-1 P-loop domains-related Interaction Interface Pymol
e4idpC3 B:-X-1/2,Y-1/2,-Z-1->C:x,y,z P-loop domains-related Interaction Interface Pymol
e4idpD2 B:x,y,z->D:X,Y,Z-1 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interaction Interface Pymol