ECOD: domain e4ifpA1

Domain ID e4ifpA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_1

UID:	001524979
Type:	Automatic domain
Parent:	e4tsmB3
Range:	A:113-262
Ligands:	MAL
PDB:	4ifp
PDB Description:	Maltose-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 1
UniProt:	P0AEX9
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4ifpA1

Domains in the same chain:

Download Pymol

e4ifpA3	A:2-117,A:264-366	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpA1	A:113-262	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpA4	A:372-459	DEATH domain	DEATH domain	DEATH domain

Domains in the same PDB:

e4ifpA3	A:2-117,A:264-366	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpA1	A:113-262	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpA4	A:372-459	DEATH domain	DEATH domain	DEATH domain
e4ifpB3	B:2-117,B:264-366	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpB1	B:113-262	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpB4	B:372-459	DEATH domain	DEATH domain	DEATH domain
e4ifpC3	C:2-117,C:264-366	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpC1	C:113-262	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ifpC4	C:372-459	DEATH domain	DEATH domain	DEATH domain

Structural contacts of domain e4ifpA1 of H-group "Periplasmic binding protein-like II":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ifpB4	A:X-1/2,Y+1/2,Z->B:x,y,z	DEATH domain	Interaction Interface Pymol
e4ifpC1	A:x,y,z->C:-X+5/2,Y-1/2,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e4ifpC1	A:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol