Domain ID e4igbB1

Download files:
  • A: beta sandwiches
  • X: Glycosyl hydrolase domain-like
  • H: V-region of surface antigen I/II (SA I/II, PAC)
  • T: V-region of surface antigen I/II (SA I/II, PAC)
  • F: Sgo0707_N1
UID: 001070069
Type: Automatic domain
Parent: e4igbA1
Range: B:-11-311
Ligands: ACT GOL NA SO4
PDB: 4igb
PDB Description: LPXTG cell wall surface protein
UniProt: A8AW49
Species:

Structure of domain e4igbB1

Domains in the same chain:

Download Pymol

e4igbB1 B:-11-311 Glycosyl hydrolase domain-like V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC)
e4igbB2 B:312-458 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f

Domains in the same PDB:

e4igbA1 A:36-311 Glycosyl hydrolase domain-like V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC)
e4igbA2 A:312-456 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4igbB1 B:-11-311 Glycosyl hydrolase domain-like V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC)
e4igbB2 B:312-458 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4igbC1 C:-12-311 Glycosyl hydrolase domain-like V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC)
e4igbC2 C:312-455 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4igbD1 D:36-311 Glycosyl hydrolase domain-like V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC)
e4igbD2 D:312-455 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f

Structural contacts of domain e4igbB1 of H-group "V-region of surface antigen I/II (SA I/II, PAC)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4igbD1 B:X,Y,Z->D:x,y,z V-region of surface antigen I/II (SA I/II, PAC) Interaction Interface Pymol
e4igbA1 B:x,y,z->A:X,Y,Z V-region of surface antigen I/II (SA I/II, PAC) Interaction Interface Pymol
e4igbA1 B:x,y,z->A:-X,-Y,Z V-region of surface antigen I/II (SA I/II, PAC) Interaction Interface Pymol
e4igbA2 B:x,y,z->A:-X,-Y,Z Immunoglobulin-related Interaction Interface Pymol
e4igbA2 B:x,y,z->A:X,-Y,-Z Immunoglobulin-related Interaction Interface Pymol
e4igbB1 B:x,y,z->B:-X,-Y,Z V-region of surface antigen I/II (SA I/II, PAC) Interaction Interface Pymol
e4igbB1 B:-X,-Y,Z->B:x,y,z V-region of surface antigen I/II (SA I/II, PAC) Interaction Interface Pymol
e4igbD2 B:x,y,z->D:X-1/2,-Y-1/2,-Z+1/2 Immunoglobulin-related Interaction Interface Pymol