ECOD: domain e4ikmA2

Domain ID e4ikmA2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_1

UID:	001758402
Type:	Automatic domain
Parent:	e3waiA4
Range:	A:113-262
Ligands:	EDO IOD MAL
PDB:	4ikm
PDB Description:	Maltose-binding periplasmic protein, Caspase recruitment domain-containing protein 8
UniProt:	P0AEX9
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4ikmA2

Domains in the same chain:

Download Pymol

e4ikmA1	A:2-114,A:263-367	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ikmA2	A:113-262	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ikmA3	A:371-463	DEATH domain	DEATH domain	DEATH domain

Domains in the same PDB:

e4ikmA1	A:2-114,A:263-367	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ikmA2	A:113-262	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4ikmA3	A:371-463	DEATH domain	DEATH domain	DEATH domain

Structural contacts of domain e4ikmA2 of H-group "Periplasmic binding protein-like II":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ikmA3	A:x,y,z->A:X-Y,X,Z-1/6	DEATH domain	Interaction Interface Pymol
e4ikmA1	A:x,y,z->A:X-Y-1,-Y-1,-Z	Periplasmic binding protein-like II	Interaction Interface Pymol