Domain ID e4il6R1

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  • A: extended segments
  • X: Photosystem II protein Y, psbY
  • H: Photosystem II protein Y, psbY
  • T: Photosystem II protein Y, psbY
  • F: PsbY
UID: 000224074
Type: Manual and representative domain
Range: R:2-35
Ligands: HEM HTG SQD
PDB: 4il6
PDB Description: Photosystem II protein Y
UniProt: Q8DKM3
Species:

Structure of domain e4il6R1

Domains in the same chain:

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e4il6R1 R:2-35 Photosystem II protein Y, psbY Photosystem II protein Y, psbY Photosystem II protein Y, psbY

Domains in the same PDB:

e4il6a2 a:11-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4il6A1 A:11-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4il6b2 b:2-328,b:445-506 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4il6b1 b:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e4il6B1 B:2-328,B:445-506 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4il6B2 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e4il6c1 c:24-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4il6C1 C:23-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4il6d2 d:11-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4il6D1 D:11-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4il6e1 e:4-81 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4il6E1 E:4-83 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4il6f1 f:12-43 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4il6F1 F:12-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4il6h1 h:2-64 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e4il6H1 H:2-64 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e4il6i1 i:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e4il6I1 I:1-36 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e4il6j1 j:4-35 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e4il6J1 J:4-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e4il6k1 k:10-46 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e4il6K1 K:10-46 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e4il6l1 l:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e4il6L1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e4il6m1 m:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e4il6M1 M:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e4il6o1 o:3-242 Outer membrane meander beta-barrels OMPA-like OMPA-like
e4il6O1 O:3-246 Outer membrane meander beta-barrels OMPA-like OMPA-like
e4il6R1 R:2-35 Photosystem II protein Y, psbY Photosystem II protein Y, psbY Photosystem II protein Y, psbY
e4il6u1 u:8-97 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4il6U1 U:8-104 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4il6v1 v:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e4il6V1 V:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e4il6x1 x:2-38 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e4il6X1 X:2-41 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e4il6y1 y:17-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e4il6Y1 Y:17-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e4il6z1 z:1-62 PsbZ-like PsbZ-like PsbZ-like
e4il6Z1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e4il6R1 of H-group "Photosystem II protein Y, psbY":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4il6E1 R:x,y,z->E:X,Y,Z Cytochrome b559 subunits Interaction Interface Pymol
e4il6F1 R:x,y,z->F:X,Y,Z Cytochrome b559 subunits Interaction Interface Pymol
e4il6X1 R:x,y,z->X:X,Y,Z Photosystem II PsbX protein Interaction Interface Pymol