Domain ID e4indR8

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: STIV_turret_3rd
UID: 001209324
Type: Automatic domain
Parent: e4indA7
Range: R:261-383
Ligands: 2HP
PDB: 4ind
PDB Description: C381 turret protein
UniProt: Q6Q0L3
Species: Sulfolobus turreted icosahedral virus 1

Structure of domain e4indR8

Domains in the same chain:

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e4indR9 R:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indR7 R:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indR8 R:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e4indA3 A:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indA6 A:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indA7 A:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indB9 B:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indB7 B:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indB8 B:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indC9 C:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indC7 C:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indC8 C:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indD9 D:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indD7 D:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indD8 D:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indE9 E:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indE7 E:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indE8 E:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indF9 F:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indF7 F:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indF8 F:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indG9 G:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indG7 G:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indG8 G:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indH9 H:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indH7 H:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indH8 H:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indI9 I:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indI7 I:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indI8 I:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indJ9 J:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indJ7 J:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indJ8 J:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indK9 K:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indK7 K:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indK8 K:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indL9 L:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indL7 L:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indL8 L:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indM9 M:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indM7 M:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indM8 M:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indN9 N:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indN7 N:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indN8 N:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indO9 O:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indO7 O:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indO8 O:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indP9 P:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indP7 P:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indP8 P:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indQ9 Q:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indQ7 Q:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indQ8 Q:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indR9 R:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indR7 R:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indR8 R:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indS9 S:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indS7 S:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indS8 S:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e4indT9 T:6-152 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indT7 T:153-260 jelly-roll Concanavalin A-like Galactose-binding domain-like
e4indT8 T:261-383 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Structural contacts of domain e4indR8 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4indS7 R:X,Y,Z->S:x,y,z Concanavalin A-like Interaction Interface Pymol
e4indS8 R:X,Y,Z->S:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4indQ8 R:x,y,z->Q:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4indO8 R:X-1,Y,Z->O:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol