Domain ID e4ir9A6

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 001257154
Type: Automatic domain
Parent: e1jx4A2
Range: A:233-341
PDB: 4ir9
PDB Description: DNA polymerase IV
UniProt: Q47155
Species:

Structure of domain e4ir9A6

Domains in the same chain:

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e4ir9A5 A:0-22,A:76-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4ir9A4 A:23-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4ir9A7 A:176-236 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ir9A6 A:233-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e4ir9A5 A:0-22,A:76-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4ir9A4 A:23-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4ir9A7 A:176-236 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ir9A6 A:233-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e4ir9F5 F:0-22,F:76-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4ir9F4 F:23-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e4ir9F7 F:176-236 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ir9F6 F:233-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e4ir9A6 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ir9A7 A:x,y,z->A:-X-1,Y-1/2,-Z SAM/DNA-glycosylase Interaction Interface Pymol
e4ir9F6 A:X,Y,Z->F:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e4ir9F6 A:-X-1,Y-1/2,-Z-1->F:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e4ir9A4 A:x,y,z->A:X,Y-1,Z Hypothetical protein Ta1206-like Interaction Interface Pymol