ECOD: domain e4irlB3

Domain ID e4irlB3

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_1

UID:	001525027
Type:	Automatic domain
Parent:	e4pqkB3
Range:	B:111-260
Ligands:	ACT EDO MLI MTT NA
PDB:	4irl
PDB Description:	Maltose-binding periplasmic protein, Novel protein similar to vertebrate guanylate binding protein family
UniProt:	P0AEX9
Species:	Danio rerio

Domain
In chain context
In PDB context

Structure of domain e4irlB3

Domains in the same chain:

Download Pymol

e4irlB4	B:1-114,B:263-370	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlB3	B:111-260	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlB1	B:370-463	DEATH domain	DEATH domain	DEATH domain

Domains in the same PDB:

e4irlA3	A:1-114,A:263-370	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlA2	A:111-260	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlA1	A:370-462	DEATH domain	DEATH domain	DEATH domain
e4irlB4	B:1-114,B:263-370	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlB3	B:111-260	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlB1	B:370-463	DEATH domain	DEATH domain	DEATH domain
e4irlC3	C:1-114,C:263-370	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlC2	C:111-260	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4irlC1	C:370-462	DEATH domain	DEATH domain	DEATH domain

Structural contacts of domain e4irlB3 of H-group "Periplasmic binding protein-like II":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4pqkB3	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pqkB3	B:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4pqkB3	B:x,y,z->A:-X-1,Y-1/2,-Z+1/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e4irlA2	B:x,y,z->A:-X-1,Y-1/2,-Z+1/2	Periplasmic binding protein-like II	Interaction Interface Pymol