Domain ID e4irnD3

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  • A: alpha bundles
  • X: Bromodomain-like
  • H: Acyl-CoA dehydrogenase C-terminal domain-like
  • T: Acyl-CoA dehydrogenase C-terminal domain-like
  • F: Acyl-CoA_dh_1
UID: 001122764
Type: Automatic domain
Parent: e1ivhA3
Range: D:217-381
Ligands: FAD
PDB: 4irn
PDB Description: PROLYL-ACP DEHYDROGENASE
UniProt: C4NCB7
Hsap BLAST neighbor: P16219
Species: [Oscillatoria] sp. PCC 6506

Structure of domain e4irnD3

Domains in the same chain:

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e4irnD2 D:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnD1 D:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnD3 D:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Domains in the same PDB:

e4irnA2 A:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnA1 A:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnA3 A:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnB2 B:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnB1 B:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnB3 B:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnC2 C:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnC1 C:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnC3 C:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnD2 D:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnD1 D:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnD3 D:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnE2 E:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnE1 E:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnE3 E:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnF2 F:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnF1 F:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnF3 F:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnG2 G:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnG1 G:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnG3 G:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4irnH2 H:4-116 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4irnH1 H:117-216 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4irnH3 H:217-381 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Structural contacts of domain e4irnD3 of H-group "Acyl-CoA dehydrogenase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4irnC1 D:x,y,z->C:X,Y,Z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e4irnC3 D:x,y,z->C:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4irnA3 D:x,y,z->A:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4irnA2 D:x,y,z->A:X,Y,Z Acyl-CoA dehydrogenase N-terminal domain-like Interaction Interface Pymol
e4irnB3 D:x,y,z->B:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4irnD1 D:X-1,Y,Z->D:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e4irnC3 D:X-1,Y,Z->C:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol