Domain ID e4iudL1

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  • A: alpha complex topology
  • X: alpha-helical domain in nickel-iron hydrogenase, large subunit
  • H: alpha-helical domain in nickel-iron hydrogenase, large subunit
  • T: alpha-helical domain in nickel-iron hydrogenase, large subunit
  • F: NiFeSe_Hases
UID: 001286822
Type: Automatic domain
Parent: e1ublL3
Range: L:96-336,L:407-509
Ligands: F3S S3F
PDB: 4iud
PDB Description: Uptake hydrogenase large subunit
UniProt: P31891
Species:

Structure of domain e4iudL1

Domains in the same chain:

e4iudL2 L:3-53,L:563-603 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4iudL4 L:54-96,L:510-562 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4iudL1 L:96-336,L:407-509 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e4iudL3 L:337-407 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit

Domains in the same PDB:

e4iudL2 L:3-53,L:563-603 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4iudL4 L:54-96,L:510-562 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e4iudL1 L:96-336,L:407-509 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e4iudL3 L:337-407 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit
e4iudS2 S:5-183 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e4iudS1 S:184-269 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit

Structural contacts of domain e4iudL1 of H-group "alpha-helical domain in nickel-iron hydrogenase, large subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4iudS2 L:X,Y,Z->S:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e4iudS1 L:X,Y,Z->S:x,y,z Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Interaction Interface Pymol
e4iudS1 L:x,y,z->S:X-1/2,-Y+1/2,-Z Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Interaction Interface Pymol
e4iudL3 L:x,y,z->L:X-1/2,-Y-1/2,-Z all-beta domain in nickel-iron hydrogenase large subunit Interaction Interface Pymol
e4iudL2 L:x,y,z->L:X-1/2,-Y-1/2,-Z Ni-Fe binding domain in nickel-iron hydrogenase large subunit Interaction Interface Pymol
e4iudL4 L:x,y,z->L:X-1/2,-Y+1/2,-Z Ni-Fe binding domain in nickel-iron hydrogenase large subunit Interaction Interface Pymol