Domain ID e4ixqD1

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  • A: alpha bundles
  • X: Bacterial photosystem II reaction centre L and M subunits-like
  • H: Bacterial photosystem II reaction centre L and M subunits-like
  • T: Bacterial photosystem II reaction centre L and M subunits-like
  • F: Photo_RC
UID: 000223194
Type: Automatic domain
Parent: e2j8cL1
Range: D:13-352
Ligands: BCR BCT CL CLA DGD FE2 LHG LMG LMT PHO PL9 SQD
PDB: 4ixq
PDB Description: PHOTOSYSTEM II D2 PROTEIN
UniProt: Q8CM25
Species:

Structure of domain e4ixqD1

Domains in the same chain:

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e4ixqD1 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like

Domains in the same PDB:

e4ixqa2 a:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixqA1 A:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixqb1 b:2-328,b:445-491 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixqb2 b:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e4ixqB1 B:2-328,B:445-491 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixqB2 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e4ixqc1 c:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixqC1 C:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixqd2 d:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixqD1 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixqe1 e:1-81 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixqE1 E:3-84 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixqf1 f:1-35 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixqF1 F:11-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixqg1 g:19-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e4ixqh1 h:1-65 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e4ixqH1 H:2-66 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e4ixqi1 i:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e4ixqI1 I:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e4ixqj1 j:1-29 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e4ixqJ1 J:7-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e4ixqk1 k:1-37 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e4ixqK1 K:10-46 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e4ixql1 l:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e4ixqL1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e4ixqm1 m:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e4ixqM1 M:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e4ixqo2 o:30-272 Outer membrane meander beta-barrels OMPA-like OMPA-like
e4ixqO1 O:30-272 Outer membrane meander beta-barrels OMPA-like OMPA-like
e4ixqu2 u:38-134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ixqU1 U:38-134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ixqv1 v:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e4ixqV1 V:27-163 Cytochrome c-like Cytochrome c Cytochrome c
e4ixqx2 x:11-47 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e4ixqX1 X:11-47 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e4ixqy1 y:19-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e4ixqz1 z:1-62 PsbZ-like PsbZ-like PsbZ-like
e4ixqZ1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e4ixqD1 of H-group "Bacterial photosystem II reaction centre L and M subunits-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ixqA1 D:x,y,z->A:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol
e4ixqB1 D:x,y,z->B:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e4ixqB2 D:x,y,z->B:X,Y,Z Photosystem II antenna protein PsbB insertion domain Interaction Interface Pymol
e4ixqE1 D:X,Y,Z->E:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e4ixqC1 D:x,y,z->C:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e4ixqO1 D:X,Y,Z->O:x,y,z OMPA-like Interaction Interface Pymol
e4ixqX1 D:X,Y,Z->X:x,y,z Photosystem II PsbX protein Interaction Interface Pymol
e4ixqF1 D:X,Y,Z->F:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e4ixqL1 D:X,Y,Z->L:x,y,z Photosystem II reaction center protein L, PsbL Interaction Interface Pymol
e4ixqH1 D:X,Y,Z->H:x,y,z Photosystem II 10 kDa phosphoprotein PsbH Interaction Interface Pymol
e4ixqV1 D:X,Y,Z->V:x,y,z Cytochrome c Interaction Interface Pymol
e4ixqM1 D:X,Y,Z->M:x,y,z Photosystem II reaction center protein M, PsbM Interaction Interface Pymol
e4ixqU1 D:X,Y,Z->U:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e4ixqJ1 D:X,Y,Z->J:x,y,z Photosystem II reaction center protein J, PsbJ Interaction Interface Pymol