Domain ID e4ixrv1

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  • A: alpha arrays
  • X: Cytochrome c-like
  • H: Cytochrome c
  • T: Cytochrome c
  • F: Cytochrom_C550
UID: 000981445
Type: Automatic domain
Parent: e1e29A1
Range: v:1-137
Ligands: DGD HEM
PDB: 4ixr
PDB Description: CYTOCHROME C-550
UniProt: P0A386
Species: Thermosynechococcus elongatus

Structure of domain e4ixrv1

Domains in the same chain:

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e4ixrv1 v:1-137 Cytochrome c-like Cytochrome c Cytochrome c

Domains in the same PDB:

e4ixra2 a:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixrA2 A:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixrb1 b:2-328,b:445-491 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixrb2 b:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e4ixrB1 B:2-328,B:445-491 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixrB2 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e4ixrc1 c:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixrC1 C:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e4ixrd2 d:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixrD2 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e4ixre1 e:1-81 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixrE1 E:1-81 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixrf1 f:1-35 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixrF1 F:1-35 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e4ixrg1 g:19-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e4ixrh1 h:1-65 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e4ixrH1 H:1-65 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e4ixri1 i:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e4ixrI1 I:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e4ixrj1 j:1-29 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e4ixrJ1 J:1-29 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e4ixrk1 k:1-37 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e4ixrK1 K:1-37 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e4ixrl1 l:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e4ixrL1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e4ixrm1 m:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e4ixrM1 M:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e4ixro2 o:30-272 Outer membrane meander beta-barrels OMPA-like OMPA-like
e4ixrO2 O:30-272 Outer membrane meander beta-barrels OMPA-like OMPA-like
e4ixru2 u:38-134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ixrU2 U:38-134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4ixrv1 v:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e4ixrV1 V:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e4ixrx2 x:11-47 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e4ixrX2 X:11-47 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e4ixry1 y:19-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e4ixrz1 z:1-62 PsbZ-like PsbZ-like PsbZ-like
e4ixrZ1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e4ixrv1 of H-group "Cytochrome c":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ixrc1 v:x,y,z->c:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e4ixru2 v:x,y,z->u:X,Y,Z SAM/DNA-glycosylase Interaction Interface Pymol
e4ixra2 v:x,y,z->a:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol
e4ixre1 v:x,y,z->e:X,Y,Z Cytochrome b559 subunits Interaction Interface Pymol