Domain ID e4j0qB5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 001231275
Type: Automatic domain
Parent: e2c78A3
Range: B:9-205
Ligands: GDP MES MG
PDB: 4j0q
PDB Description: Elongation factor Tu-A
UniProt: Q88QP8
Hsap BLAST neighbor: P49411
Species:

Structure of domain e4j0qB5

Domains in the same chain:

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e4j0qB5 B:9-205 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4j0qB6 B:206-304 cradle loop barrel RIFT-related Alanine racemase-C
e4j0qB4 B:305-397 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e4j0qA2 A:9-205 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4j0qA3 A:206-304 cradle loop barrel RIFT-related Alanine racemase-C
e4j0qA1 A:305-397 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4j0qB5 B:9-205 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4j0qB6 B:206-304 cradle loop barrel RIFT-related Alanine racemase-C
e4j0qB4 B:305-397 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4j0qC2 C:9-205 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4j0qC3 C:206-304 cradle loop barrel RIFT-related Alanine racemase-C
e4j0qC1 C:305-397 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4j0qD2 D:9-205 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4j0qD3 D:206-304 cradle loop barrel RIFT-related Alanine racemase-C
e4j0qD1 D:305-397 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e4j0qE4 E:9-42,E:62-207 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4j0qE2 E:206-304 cradle loop barrel RIFT-related Alanine racemase-C
e4j0qE3 E:303-397 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Structural contacts of domain e4j0qB5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4j0qE2 B:-X+3/2,Y-1/2,-Z->E:x,y,z RIFT-related Interaction Interface Pymol
e4j0qD2 B:-X+3/2,Y-1/2,-Z->D:x,y,z P-loop domains-related Interaction Interface Pymol
e4j0qC3 B:X,Y,Z->C:x,y,z RIFT-related Interaction Interface Pymol