Domain ID e4j3oD5

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Prealbumin-like
  • F: Usher
UID: 001312418
Type: Manual and representative domain
Range: D:668-749
PDB: 4j3o
PDB Description: OUTER MEMBRANE USHER PROTEIN FIMD
UniProt: P30130
Species:

Structure of domain e4j3oD5

Domains in the same chain:

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e4j3oD7 D:26-122 FimD N-terminal domain-like FimD N-terminal domain-like FimD N-terminal domain-like
e4j3oD3 D:123-245,D:320-453,D:474-667 Outer membrane meander beta-barrels Usher PapC translocation pore Usher PapC translocation pore
e4j3oD6 D:238-311 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4j3oD5 D:668-749 Immunoglobulin-like beta-sandwich Immunoglobulin-related Prealbumin-like
e4j3oD4 D:750-834 Immunoglobulin-like beta-sandwich Immunoglobulin-related Prealbumin-like

Domains in the same PDB:

e4j3oC2 C:1-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4j3oC1 C:117-205 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4j3oD7 D:26-122 FimD N-terminal domain-like FimD N-terminal domain-like FimD N-terminal domain-like
e4j3oD3 D:123-245,D:320-453,D:474-667 Outer membrane meander beta-barrels Usher PapC translocation pore Usher PapC translocation pore
e4j3oD6 D:238-311 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4j3oD5 D:668-749 Immunoglobulin-like beta-sandwich Immunoglobulin-related Prealbumin-like
e4j3oD4 D:750-834 Immunoglobulin-like beta-sandwich Immunoglobulin-related Prealbumin-like
e4j3oF1 F:1-154 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4j3oG1 G:1-144 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4j3oH1 H:1-158 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4j3oH2 H:159-279 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f

Structural contacts of domain e4j3oD5 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4j3oG1 D:x,y,z->G:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4j3oC2 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4j3oD3 D:x,y,z->D:-X-1/2,Y-1/2,-Z+1/2 Usher PapC translocation pore Interaction Interface Pymol