Domain ID e4j93A1

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 001066036
Type: Automatic domain
Parent: e2pxrC1
Range: A:1-146
Ligands: 0OE 1JR
PDB: 4j93
PDB Description: Gag protein
UniProt: Q79791
Species: Human immunodeficiency virus 1

Structure of domain e4j93A1

Structural contacts of domain e4j93A1 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4j93A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:X-1/2,-Y+1/2,-Z->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:-X,Y-1/2,-Z+1/2->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:x,y,z->A:X-1/2,-Y-1/2,-Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:X-1/2,-Y-1/2,-Z->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:x,y,z->A:-X+1/2,-Y,Z-1/2 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:-X+1/2,-Y,Z-1/2->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:x,y,z->A:X,Y-1,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e4j93A1 A:X,Y-1,Z->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol