Domain ID e4jbrA1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: TGT
UID: 001147518
Type: Automatic domain
Parent: e1r5yA1
Range: A:11-385
Ligands: DMS ZN
PDB: 4jbr
PDB Description: tRNA-guanine transglycosylase
UniProt: P28720
Hsap BLAST neighbor: Q9BXR0
Species:

Structure of domain e4jbrA1

Domains in the same chain:

e4jbrA1 A:11-385 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e4jbrA1 A:11-385 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e4jbrA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jbrA1 A:x,y,z->A:X,X-Y,-Z-1/6 TIM barrels Interaction Interface Pymol
e4jbrA1 A:X,X-Y,-Z-1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e4jbrA1 A:x,y,z->A:X-Y,X,Z-1/6 TIM barrels Interaction Interface Pymol
e4jbrA1 A:X-Y,X,Z-1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e4jbrA1 A:x,y,z->A:-Y+1,-X+1,-Z+1/6 TIM barrels Interaction Interface Pymol
e4jbrA1 A:-Y+1,-X+1,-Z+1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e4jbrA1 A:x,y,z->A:Y,X,-Z-1/3 TIM barrels Interaction Interface Pymol
e4jbrA1 A:Y,X,-Z-1/3->A:x,y,z TIM barrels Interaction Interface Pymol