Domain ID e4jc8B1

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  • A: alpha complex topology
  • X: alpha-helical domain in sec1/munc18-like (SM) proteins
  • H: alpha-helical domain in sec1/munc18-like (SM) proteins
  • T: alpha-helical domain in sec1/munc18-like (SM) proteins
  • F: Sec1
UID: 001345500
Type: Automatic domain
Parent: e1epuA1
Range: B:232-276,B:296-531
PDB: 4jc8
PDB Description: HOPS component Vps33
UniProt: G0SCM5
Hsap BLAST neighbor: Q96AX1
Species:

Structure of domain e4jc8B1

Domains in the same chain:

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e4jc8B2 B:5-140 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e4jc8B3 B:141-241,B:559-654 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e4jc8B1 B:232-276,B:296-531 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins

Domains in the same PDB:

e4jc8A1 A:5-140 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e4jc8A3 A:141-241,A:556-654 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e4jc8A2 A:242-546 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins
e4jc8B2 B:5-140 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e4jc8B3 B:141-241,B:559-654 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e4jc8B1 B:232-276,B:296-531 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins

Structural contacts of domain e4jc8B1 of H-group "alpha-helical domain in sec1/munc18-like (SM) proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jc8A2 B:x,y,z->A:X,Y,Z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e4jc8A2 B:x,y,z->A:X,Y,Z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e4jc8A2 B:-X,Y-1/2,-Z+1->B:x,y,z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e4jc8A2 B:-X+1,Y-1/2,-Z+1->B:x,y,z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e4jc8A2 B:X-1,Y,Z->A:x,y,z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e4jc8A2 B:x,y,z->A:-X+1,Y-1/2,-Z+1 alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol