Domain ID e4jcfC1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Polyoma_coat
UID: 001096585
Type: Automatic domain
Parent: e1vpsA1
Range: C:25-288
Ligands: GOL
PDB: 4jcf
PDB Description: Major capsid protein VP1
UniProt: P03089
Species: JC polyomavirus

Structure of domain e4jcfC1

Structural contacts of domain e4jcfC1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jcfB1 C:x,y,z->B:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4jcfD1 C:X,Y,Z->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4jcfA1 C:x,y,z->A:-X+1,Y,-Z+1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4jcfE1 C:x,y,z->E:X-1/2,Y+1/2,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol