ECOD: domain e4jcmA4

Domain ID e4jcmA4

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Alpha-amylase

UID:	001144879
Type:	Automatic domain
Parent:	e1ua7A2
Range:	A:6-396
Ligands:	CA CL EDO GOL NA SO4
PDB:	4jcm
PDB Description:	CYCLODEXTRIN GLUCANOTRANSFERASE
UniProt:	B9A1J6
Hsap BLAST neighbor:	Q07837
Species:	[Bacillus] clarkii

Domains in the same chain:

Download Pymol

e4jcmA4	A:6-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4jcmA1	A:397-485	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e4jcmA10	A:486-567	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jcmA9	A:568-674	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Domains in the same PDB:

e4jcmA4	A:6-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4jcmA1	A:397-485	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e4jcmA10	A:486-567	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4jcmA9	A:568-674	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Structural contacts of domain e4jcmA4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4jcmA4	A:x,y,z->A:X,Y,Z-1	TIM barrels	Interaction Interface Pymol
e4jcmA4	A:X,Y,Z-1->A:x,y,z	TIM barrels	Interaction Interface Pymol
e4jcmA9	A:-Y,X-Y,Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol