ECOD: domain e4jd2G1

Domain ID e4jd2G1

A: alpha superhelices
X: Repetitive alpha hairpins
H: Arp2/3 complex 16 KDa subunit ARPC5
T: Arp2/3 complex 16 KDa subunit ARPC5
F: P16-Arc

UID:	001066930
Type:	Automatic domain
Parent:	e1k8kG1
Range:	G:9-151
Ligands:	PG4
PDB:	4jd2
PDB Description:	Actin-related protein 2/3 complex subunit 5
UniProt:	Q3SYX9
Hsap BLAST neighbor:	O15511
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e4jd2G1

Domains in the same chain:

Download Pymol

e4jd2G1	G:9-151	Repetitive alpha hairpins	Arp2/3 complex 16 KDa subunit ARPC5	Arp2/3 complex 16 KDa subunit ARPC5

Domains in the same PDB:

e4jd2A2	A:3-159	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4jd2A1	A:160-416	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4jd2B1	B:4-140	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4jd2B2	B:141-388	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4jd2C1	C:1-288,C:319-372	beta-propeller-like	beta-propeller	7-bladed
e4jd2D2	D:1-120	Type III secretory system chaperone-like	Arp2/3 complex subunits	Arp2/3 complex subunits
e4jd2D1	D:121-283	Type III secretory system chaperone-like	Arp2/3 complex subunits	Arp2/3 complex subunits
e4jd2E1	E:2-174	Arp2/3 complex 21 kDa subunit ARPC3	Arp2/3 complex 21 kDa subunit ARPC3	Arp2/3 complex 21 kDa subunit ARPC3
e4jd2F1	F:3-168	Type III secretory system chaperone-like	Arp2/3 complex subunits	Arp2/3 complex subunits
e4jd2G1	G:9-151	Repetitive alpha hairpins	Arp2/3 complex 16 KDa subunit ARPC5	Arp2/3 complex 16 KDa subunit ARPC5
e4jd2H1	H:3-140	Gelsolin-like	Gelsolin-like	Gelsolin-like

Structural contacts of domain e4jd2G1 of H-group "Arp2/3 complex 16 KDa subunit ARPC5":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4jd2F1	G:x,y,z->F:X,Y,Z	Arp2/3 complex subunits	Interaction Interface Pymol
e4jd2C1	G:x,y,z->C:X,Y,Z	beta-propeller	Interaction Interface Pymol
e4jd2B2	G:x,y,z->B:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol
e4jd2C1	G:x,y,z->C:-Y,X-Y-1,Z-1/3	beta-propeller	Interaction Interface Pymol
e4jd2A1	G:x,y,z->A:-X,-Y-1,Z-1/2	Ribonuclease H-like	Interaction Interface Pymol
e4jd2A2	G:x,y,z->A:-X,-Y-1,Z-1/2	Ribonuclease H-like	Interaction Interface Pymol
e4jd2D1	G:X-Y-1,X-1,Z-1/6->D:x,y,z	Arp2/3 complex subunits	Interaction Interface Pymol
e4jd2H1	G:x,y,z->H:-Y,X-Y-1,Z+2/3	Gelsolin-like	Interaction Interface Pymol