Domain ID e4jd5A4

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 001247069
Type: Automatic domain
Parent: e1pvdA3
Range: A:342-526
Ligands: CA GOL TZD
PDB: 4jd5
PDB Description: Benzoylformate decarboxylase
UniProt: P20906
Species: Pseudomonas putida

Structure of domain e4jd5A4

Structural contacts of domain e4jd5A4 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jd5A4 A:x,y,z->A:-X-1,-Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jd5A5 A:x,y,z->A:-X-1,-Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jd5A5 A:-X-1,-Y,Z->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jd5A4 A:-X-1,-Y,Z->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jd5A6 A:x,y,z->A:X-1/2,-Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e4jd5A5 A:X-1/2,-Y-1/2,-Z+1/2->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol