Domain ID e4jdmF3

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  • A: extended segments
  • X: Immunodominant antigen Pgp3 helical domain
  • H: Immunodominant antigen Pgp3 helical domain
  • T: Immunodominant antigen Pgp3 helical domain
  • F: Pgp3_helical
UID: 001070093
Type: Automatic domain
Parent: e4jdmA2
Range: F:72-114
PDB: 4jdm
PDB Description: VIRULENCE PLASMID PROTEIN PGP3-D
Species:

Structure of domain e4jdmF3

Domains in the same chain:

e4jdmF2 F:-4-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmF3 F:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmF1 F:115-264 jelly-roll TNF-like TNF-like

Domains in the same PDB:

e4jdmA1 A:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmA2 A:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmA3 A:115-264 jelly-roll TNF-like TNF-like
e4jdmB1 B:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmB2 B:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmB3 B:115-263 jelly-roll TNF-like TNF-like
e4jdmC1 C:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmC2 C:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmC3 C:115-264 jelly-roll TNF-like TNF-like
e4jdmD2 D:2-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmD3 D:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmD1 D:115-264 jelly-roll TNF-like TNF-like
e4jdmE2 E:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmE3 E:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmE1 E:115-263 jelly-roll TNF-like TNF-like
e4jdmF2 F:-4-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdmF3 F:72-114 Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain Immunodominant antigen Pgp3 helical domain
e4jdmF1 F:115-264 jelly-roll TNF-like TNF-like

Structural contacts of domain e4jdmF3 of H-group "Immunodominant antigen Pgp3 helical domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jdmD2 F:x,y,z->D:X,Y,Z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdmD3 F:x,y,z->D:X,Y,Z Immunodominant antigen Pgp3 helical domain Interaction Interface Pymol
e4jdmE3 F:x,y,z->E:X,Y,Z Immunodominant antigen Pgp3 helical domain Interaction Interface Pymol