Domain ID e4jdoA1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: TNF-like
  • T: TNF-like
  • F: Chlam_vir
UID: 001070097
Type: Automatic domain
Parent: e4jdmC3
Range: A:70-261
Ligands: NA
PDB: 4jdo
PDB Description: Virulence plasmid protein pGP3-D
UniProt: A0A0E9CJA7
Species: Chlamydia trachomatis

Structure of domain e4jdoA1

Domains in the same chain:

e4jdoA2 A:2-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoA1 A:70-261 jelly-roll TNF-like TNF-like

Domains in the same PDB:

e4jdoA2 A:2-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoA1 A:70-261 jelly-roll TNF-like TNF-like
e4jdoB2 B:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoB1 B:70-263 jelly-roll TNF-like TNF-like
e4jdoC2 C:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoC1 C:70-262 jelly-roll TNF-like TNF-like
e4jdoD2 D:2-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoD1 D:70-263 jelly-roll TNF-like TNF-like
e4jdoE2 E:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoE1 E:70-262 jelly-roll TNF-like TNF-like
e4jdoF2 F:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoF1 F:70-262 jelly-roll TNF-like TNF-like
e4jdoG2 G:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoG1 G:70-262 jelly-roll TNF-like TNF-like
e4jdoH2 H:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoH1 H:70-261 jelly-roll TNF-like TNF-like
e4jdoI2 I:1-71 Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain Immunodominant antigen Pgp3 N-terminal domain
e4jdoI1 I:70-262 jelly-roll TNF-like TNF-like

Structural contacts of domain e4jdoA1 of H-group "TNF-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jdoB2 A:X,Y,Z->B:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoB1 A:X,Y,Z->B:x,y,z TNF-like Interaction Interface Pymol
e4jdoC2 A:X,Y,Z->C:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoC1 A:X,Y,Z->C:x,y,z TNF-like Interaction Interface Pymol
e4jdoD2 A:-Y,X-Y-1,Z-1/3->D:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoB2 A:-Y,X-Y-1,Z-1/3->B:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoF2 A:-Y,X-Y-1,Z-1/3->F:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoH1 A:-X+1,-Y,Z-1/2->H:x,y,z TNF-like Interaction Interface Pymol
e4jdoA2 A:-Y,X-Y-1,Z-1/3->A:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoC2 A:-Y,X-Y-1,Z-1/3->C:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol
e4jdoF1 A:X,Y,Z->F:x,y,z TNF-like Interaction Interface Pymol
e4jdoI2 A:-X+1,-Y,Z-1/2->I:x,y,z Immunodominant antigen Pgp3 N-terminal domain Interaction Interface Pymol