Domain ID e4jekA13

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  • A: alpha bundles
  • X: Bromodomain-like
  • H: Acyl-CoA dehydrogenase C-terminal domain-like
  • T: Acyl-CoA dehydrogenase C-terminal domain-like
  • F: Acyl-CoA_dh_2
UID: 001234354
Type: Automatic domain
Parent: e4doyA1
Range: A:237-417
PDB: 4jek
PDB Description: Dibenzothiophene desulfurization enzyme C
UniProt: P54998
Species: Rhodococcus sp. IGTS8

Structure of domain e4jekA13

Domains in the same chain:

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e4jekA15 A:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekA14 A:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekA13 A:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Domains in the same PDB:

e4jekA15 A:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekA14 A:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekA13 A:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekB15 B:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekB14 B:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekB13 B:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekC15 C:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekC14 C:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekC13 C:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekD15 D:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekD14 D:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekD13 D:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekE15 E:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekE14 E:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekE13 E:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekF15 F:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekF14 F:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekF13 F:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekG15 G:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekG14 G:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekG13 G:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e4jekH15 H:19-124 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e4jekH14 H:125-236 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e4jekH13 H:237-417 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Structural contacts of domain e4jekA13 of H-group "Acyl-CoA dehydrogenase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jekH14 A:X,Y,Z->H:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e4jekH13 A:X,Y,Z->H:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4jekF13 A:X,Y,Z->F:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4jekE13 A:X,Y,Z->E:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4jekG13 A:X,Y,Z->G:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e4jekH14 A:x,y,z->H:X,Y-1,Z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e4jekD14 A:X,Y,Z->D:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol