Domain ID e4jfaA2

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 001260991
Type: Automatic domain
Parent: e1r6tA2
Range: A:245-488,A:513-629
Ligands: BME TRP
PDB: 4jfa
PDB Description: TRYPTOPHAN--TRNA LIGASE
UniProt: Q8IDW3
Hsap BLAST neighbor: P23381
Species:

Structure of domain e4jfaA2

Domains in the same chain:

e4jfaA2 A:245-488,A:513-629 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e4jfaA2 A:245-488,A:513-629 HUP domain-like HUP domains HUP domains
e4jfaB1 B:245-486,B:513-638 HUP domain-like HUP domains HUP domains
e4jfaC1 C:245-486,C:513-631 HUP domain-like HUP domains HUP domains
e4jfaD1 D:245-484,D:513-629 HUP domain-like HUP domains HUP domains

Structural contacts of domain e4jfaA2 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jfaC1 A:X,Y,Z->C:x,y,z HUP domains Interaction Interface Pymol
e4jfaB1 A:X,Y,Z->B:x,y,z HUP domains Interaction Interface Pymol
e4jfaC1 A:x,y,z->C:X-1,Y,Z HUP domains Interaction Interface Pymol
e4jfaB1 A:-X+1,Y-1/2,-Z->B:x,y,z HUP domains Interaction Interface Pymol
e4jfaA2 A:x,y,z->A:X-1,Y,Z HUP domains Interaction Interface Pymol
e4jfaA2 A:X-1,Y,Z->A:x,y,z HUP domains Interaction Interface Pymol
e4jfaD1 A:X,Y,Z-1->D:x,y,z HUP domains Interaction Interface Pymol