| UID: | 001829561 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4i3rG1 |
| Range: | A:1-169 |
| Ligands: | NAG |
| PDB: | 4jpk |
| PDB Description: | GERMLINE-TARGETING HIV-1 GP120 ENGINEERED OUTER DOMAIN, EOD-GT6 |
| UniProt: | P04578 |
| Species: | Human immunodeficiency virus 1 |
Structure of domain e4jpkA1
Domains in the same chain:
| e4jpkA1 | A:1-169 | Ribosomal protein L31e-like | Ribosomal protein L31e/gp120 outer domain | Ribosomal protein L31e/gp120 outer domain |
Domains in the same PDB:
Structural contacts of domain e4jpkA1 of H-group "Ribosomal protein L31e/gp120 outer domain":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4jpkH1 | A:X,Y,Z->H:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4jpkA1 | A:x,y,z->A:-X,Y,-Z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4jpkA1 | A:-X,Y,-Z->A:x,y,z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4jpkL1 | A:X,Y,Z->L:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4jpkL2 | A:X-1/2,Y+1/2,Z->L:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4jpkA1 | A:x,y,z->A:-X,Y,-Z+1 | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4jpkA1 | A:-X,Y,-Z+1->A:x,y,z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4jpkH1 | A:-X,Y,-Z->H:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4jpkL1 | A:-X,Y,-Z+1->L:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4jpkH1 | A:-X,Y,-Z+1->H:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e4jpkH2 | A:X-1/2,Y+1/2,Z->H:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
