Domain ID e4jucB3

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 000224832
Type: Automatic domain
Parent: e1pvdA3
Range: B:342-527
Ligands: CA GOL TPP
PDB: 4juc
PDB Description: BENZOYLFORMATE DECARBOXYLASE
UniProt: P20906
Species: Pseudomonas putida

Structure of domain e4jucB3

Domains in the same chain:

e4jucB2 B:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucB1 B:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4jucB3 B:342-527 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e4jucA5 A:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucA6 A:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4jucA4 A:342-526 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucB2 B:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucB1 B:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4jucB3 B:342-527 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucC5 C:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucC6 C:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4jucC4 C:342-527 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucD5 D:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4jucD6 D:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4jucD4 D:342-526 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e4jucB3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4jucD4 B:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jucD5 B:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jucA5 B:x,y,z->A:-X+1/2,-Y,Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jucA4 B:x,y,z->A:-X+1/2,-Y,Z-1/2 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4jucA6 B:x,y,z->A:-X-1/2,-Y,Z-1/2 Rossmann-related Interaction Interface Pymol