| UID: | 001829578 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4rfnG2 |
| Range: | A:44-255,A:474-492 |
| Ligands: | IPA NAG |
| PDB: | 4k0a |
| PDB Description: | HIV-1 YU2 GP120 GLYCOPROTEIN |
| UniProt: | P35961 |
| Species: | Human immunodeficiency virus 1 |
Structure of domain e4k0aA1
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e4k0aA1 of H-group "gp120 inner domain":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4k0aR1 | A:X,Y,Z->R:x,y,z | omega toxin-related | Interaction Interface Pymol |
| e4k0aA1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z | gp120 inner domain | Interaction Interface Pymol |
| e4k0aA2 | A:X-1/2,-Y+1/2,-Z->A:x,y,z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4k0aA1 | A:X-1/2,-Y+1/2,-Z->A:x,y,z | gp120 inner domain | Interaction Interface Pymol |
| e4k0aA2 | A:x,y,z->A:X,-Y,-Z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4k0aA2 | A:X,-Y,-Z->A:x,y,z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4k0aA1 | A:x,y,z->A:-X,Y,-Z-1/2 | gp120 inner domain | Interaction Interface Pymol |
| e4k0aA1 | A:-X,Y,-Z-1/2->A:x,y,z | gp120 inner domain | Interaction Interface Pymol |
| e4k0aR1 | A:x,y,z->R:-X-1/2,-Y+1/2,Z-1/2 | omega toxin-related | Interaction Interface Pymol |
| e4k0aA2 | A:x,y,z->A:-X,Y,-Z+1/2 | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4k0aA1 | A:x,y,z->A:-X,Y,-Z+1/2 | gp120 inner domain | Interaction Interface Pymol |
| e4k0aA1 | A:-X,Y,-Z+1/2->A:x,y,z | gp120 inner domain | Interaction Interface Pymol |
| e4k0aA2 | A:-X,Y,-Z+1/2->A:x,y,z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4k0aA2 | A:-X-1/2,-Y+1/2,Z-1/2->A:x,y,z | Ribosomal protein L31e/gp120 outer domain | Interaction Interface Pymol |
| e4k0aR1 | A:X-1/2,-Y+1/2,-Z->R:x,y,z | omega toxin-related | Interaction Interface Pymol |
