ECOD: domain e4k0jC5

Domain ID e4k0jC5

A: alpha bundles
X: Multidrug efflux transporter AcrB transmembrane domain
H: Multidrug efflux transporter AcrB transmembrane domain
T: Multidrug efflux transporter AcrB transmembrane domain
F: ACR_tran

UID:	001314829
Type:	Automatic domain
Parent:	e1iwgA1
Range:	C:4-41,C:313-465
PDB:	4k0j
PDB Description:	HEAVY METAL CATION TRICOMPONENT EFFLUX PUMP ZNEA(CZCA- LIKE)
UniProt:	Q1LCD8
Species:

Domains in the same chain:

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e4k0jC5	C:4-41,C:313-465	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jC3	C:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC2	C:133-180,C:254-312	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC6	C:181-253	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jC1	C:466-510,C:810-1017	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jC8	C:511-624	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC7	C:625-667,C:757-809	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC4	C:668-756	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain

Domains in the same PDB:

e4k0jA1	A:4-41,A:324-487	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jA2	A:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jA3	A:133-180,A:265-323	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jA4	A:181-264	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jA5	A:502-549,A:849-1018	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jA6	A:550-663	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jA7	A:664-706,A:796-848	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jA8	A:707-795	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jB6	B:4-41,B:324-487	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jB2	B:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jB8	B:133-180,B:265-323	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jB1	B:181-264	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jB5	B:502-549,B:849-1018	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jB7	B:550-663	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jB3	B:664-706,B:796-848	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jB4	B:707-795	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jC5	C:4-41,C:313-465	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jC3	C:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC2	C:133-180,C:254-312	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC6	C:181-253	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jC1	C:466-510,C:810-1017	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jC8	C:511-624	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC7	C:625-667,C:757-809	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jC4	C:668-756	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jD5	D:4-41,D:313-465	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jD3	D:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jD2	D:133-180,D:254-312	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jD6	D:181-253	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jD1	D:466-510,D:810-1018	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jD8	D:511-624	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jD7	D:625-667,D:757-809	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jD4	D:668-756	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jE5	E:4-41,E:313-465	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jE3	E:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jE2	E:133-180,E:254-312	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jE6	E:181-253	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jE9	E:466-510,E:810-1018	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jE8	E:511-624	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jE7	E:625-667,E:757-809	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jE10	E:668-756	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jF5	F:4-41,F:313-465	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jF3	F:42-132	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jF2	F:133-180,F:254-312	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jF6	F:181-253	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain
e4k0jF1	F:466-510,F:810-1017	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain	Multidrug efflux transporter AcrB transmembrane domain
e4k0jF8	F:511-624	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jF7	F:625-667,F:757-809	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB pore domain
e4k0jF4	F:668-756	Alpha-beta plaits	Ferredoxin domains in multidrug efflux transporter	Multidrug efflux transporter AcrB TolC docking domain

Structural contacts of domain e4k0jC5 of H-group "Multidrug efflux transporter AcrB transmembrane domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4k0jA5	C:x,y,z->A:X,Y,Z	Multidrug efflux transporter AcrB transmembrane domain	Interaction Interface Pymol