ECOD: domain e4k2mA1

Domain ID e4k2mA1

A: a/b three-layered sandwiches
X: PLP-dependent transferases
H: PLP-dependent transferases
T: PLP-dependent transferases
F: DegT_DnrJ_EryC1

UID:	001820969
Type:	Manual and representative domain
Range:	A:69-308
Ligands:	ACT EDO O1G
PDB:	4k2m
PDB Description:	NTD biosynthesis operon protein NtdA
UniProt:	O07566
Species:

Domains in the same chain:

Download Pymol

e4k2mA3	A:1-68	N-terminal domain in NTD biosynthesis operon protein NtdA	N-terminal domain in NTD biosynthesis operon protein NtdA	N-terminal domain in NTD biosynthesis operon protein NtdA
e4k2mA1	A:69-308	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e4k2mA2	A:309-440	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e4k2mA3	A:1-68	N-terminal domain in NTD biosynthesis operon protein NtdA	N-terminal domain in NTD biosynthesis operon protein NtdA	N-terminal domain in NTD biosynthesis operon protein NtdA
e4k2mA1	A:69-308	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e4k2mA2	A:309-440	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e4k2mB2	B:1-68	N-terminal domain in NTD biosynthesis operon protein NtdA	N-terminal domain in NTD biosynthesis operon protein NtdA	N-terminal domain in NTD biosynthesis operon protein NtdA
e4k2mB1	B:69-308	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e4k2mB3	B:309-439	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e4k2mA1 of H-group "PLP-dependent transferases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4k2mB3	A:X,Y,Z->B:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e4k2mB1	A:X,Y,Z->B:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e4k2mA3	A:-X+1,Y-1/2,-Z->A:x,y,z	N-terminal domain in NTD biosynthesis operon protein NtdA	Interaction Interface Pymol
e4k2mA3	A:-X,Y-1/2,-Z->A:x,y,z	N-terminal domain in NTD biosynthesis operon protein NtdA	Interaction Interface Pymol
e4k2mB1	A:X-1,Y,Z->B:x,y,z	PLP-dependent transferases	Interaction Interface Pymol