ECOD: domain e4k3jB2

Domain ID e4k3jB2

A: few secondary structure elements
X: Trefoil/Plexin domain-like
H: Trefoil/Plexin domain-like
T: Trefoil/Plexin domain-like
F: PSI

UID:	001095594
Type:	Automatic domain
Parent:	e1shyB2
Range:	B:516-564
PDB:	4k3j
PDB Description:	Hepatocyte growth factor beta chain
UniProt:	P08581
Hsap BLAST neighbor:	P08581
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4k3jB2

Domains in the same chain:

Download Pymol

e4k3jB1	B:39-515	beta-propeller-like	beta-propeller	7-bladed
e4k3jB2	B:516-564	Trefoil/Plexin domain-like	Trefoil/Plexin domain-like	Trefoil/Plexin domain-like

Domains in the same PDB:

e4k3jA1	A:495-721	cradle loop barrel	RIFT-related	FMN-binding split barrel 2
e4k3jB1	B:39-515	beta-propeller-like	beta-propeller	7-bladed
e4k3jB2	B:516-564	Trefoil/Plexin domain-like	Trefoil/Plexin domain-like	Trefoil/Plexin domain-like
e4k3jH2	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4k3jH1	H:114-215	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4k3jL2	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4k3jL1	L:108-211	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4k3jB2 of H-group "Trefoil/Plexin domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4k3jA1	B:x,y,z->A:X-1/2,-Y+1/2,-Z	RIFT-related	Interaction Interface Pymol