Domain ID e4k3rB3

Download files:
  • A: a+b two layers
  • X: DNA clamp
  • H: DNA clamp
  • T: DNA clamp
  • F: DNA_pol3_beta_3
UID: 001013933
Type: Automatic domain
Parent: e1ok7A3
Range: B:233-358
Ligands: PEG
PDB: 4k3r
PDB Description: DNA POLYMERASE III SUBUNIT BETA
UniProt: P0A988
Species:

Structure of domain e4k3rB3

Structural contacts of domain e4k3rB3 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k3rA1 B:x,y,z->A:X,Y,Z DNA clamp Interaction Interface Pymol
e4k3rB3 B:x,y,z->B:-X,Y-1/2,-Z+1 DNA clamp Interaction Interface Pymol
e4k3rB2 B:x,y,z->B:-X,Y-1/2,-Z+1 DNA clamp Interaction Interface Pymol
e4k3rB2 B:-X,Y-1/2,-Z+1->B:x,y,z DNA clamp Interaction Interface Pymol
e4k3rB3 B:-X,Y-1/2,-Z+1->B:x,y,z DNA clamp Interaction Interface Pymol
e4k3rA2 B:X,Y,Z-1->A:x,y,z DNA clamp Interaction Interface Pymol
e4k3rA3 B:X,Y,Z-1->A:x,y,z DNA clamp Interaction Interface Pymol
e4k3rA1 B:x,y,z->A:-X+1,Y-1/2,-Z+1 DNA clamp Interaction Interface Pymol