Domain ID e4k4yI4

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_1
UID: 001256430
Type: Automatic domain
Parent: e1ra6A2
Range: I:1-369
Ligands: ACT DCT GOL
PDB: 4k4y
PDB Description: RNA-dependent RNA polymerase
UniProt: Q5UEA2
Species:

Structure of domain e4k4yI4

Domains in the same chain:

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e4k4yI4 I:1-369 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4k4yI5 I:370-463 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e4k4yA4 A:1-369 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4k4yA5 A:370-463 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4k4yE4 E:1-369 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4k4yE5 E:370-463 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4k4yI4 I:1-369 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4k4yI5 I:370-463 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4k4yM4 M:1-369 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4k4yM5 M:370-463 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e4k4yI4 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k4yE4 I:x,y,z->E:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4k4yM5 I:x,y,z->M:X-1,Y,Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4k4yI4 I:x,y,z->I:X-1,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4k4yI4 I:X-1,Y,Z->I:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4k4yI4 I:x,y,z->I:X,Y-1,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4k4yI4 I:X,Y-1,Z->I:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol