ECOD: domain e4k6bB1

Domain ID e4k6bB1

A: beta sandwiches
X: jelly-roll
H: TNF-like
T: TNF-like
F: Phage_tail_NK

UID:	001095601
Type:	Automatic domain
Parent:	e3rwnA1
Range:	B:162-317
Ligands:	GLU PO4
PDB:	4k6b
PDB Description:	HS1 knob domain
UniProt:	B5YYV7
Species:	unidentified phage

Domains in the same chain:

Download Pymol

e4k6bB1	B:162-317	jelly-roll	TNF-like	TNF-like

Domains in the same PDB:

e4k6bA1	A:164-317	jelly-roll	TNF-like	TNF-like
e4k6bB1	B:162-317	jelly-roll	TNF-like	TNF-like
e4k6bC1	C:165-317	jelly-roll	TNF-like	TNF-like

Structural contacts of domain e4k6bB1 of H-group "TNF-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4k6bA1	B:x,y,z->A:X,Y,Z	TNF-like	Interaction Interface Pymol
e4k6bC1	B:X,Y,Z->C:x,y,z	TNF-like	Interaction Interface Pymol
e4k6bB1	B:x,y,z->B:-X+5/2,-Y,Z-1/2	TNF-like	Interaction Interface Pymol
e4k6bB1	B:-X+5/2,-Y,Z-1/2->B:x,y,z	TNF-like	Interaction Interface Pymol
e4k6bA1	B:x,y,z->A:-X+3,Y-1/2,-Z+1/2	TNF-like	Interaction Interface Pymol
e4k6bC1	B:x,y,z->C:-X+5/2,-Y,Z-1/2	TNF-like	Interaction Interface Pymol
e4k6bA1	B:-X+5/2,-Y,Z-1/2->A:x,y,z	TNF-like	Interaction Interface Pymol
e4k6bC1	B:-X+5/2,-Y,Z-1/2->C:x,y,z	TNF-like	Interaction Interface Pymol