Domain ID e4k6oC1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 001289119
Type: Automatic domain
Parent: e3pnpA1
Range: C:3-253
Ligands: 6MU CL EOH GOL MG NA TRS
PDB: 4k6o
PDB Description: Uridine phosphorylase
UniProt: Q9K4U1
Hsap BLAST neighbor: Q16831
Species: Vibrio cholerae

Structure of domain e4k6oC1

Structural contacts of domain e4k6oC1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k6oD1 C:X,Y,Z->D:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oB1 C:x,y,z->B:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oF1 C:x,y,z->F:-X,Y-1/2,-Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oE1 C:X,Y,Z->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oA1 C:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oF1 C:X,Y,Z-1->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oE1 C:X,Y,Z-1->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4k6oA1 C:x,y,z->A:X-1,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol