Domain ID e4k9pD1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 001013018
Type: Automatic domain
Parent: e2ez9A1
Range: D:182-341
PDB: 4k9p
PDB Description: BENZOYLFORMATE DECARBOXYLASE
UniProt: P20906
Species: Pseudomonas putida

Structure of domain e4k9pD1

Domains in the same chain:

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e4k9pD3 D:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pD1 D:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9pD2 D:342-525 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e4k9pA2 A:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pA1 A:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9pA3 A:342-526 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pB3 B:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pB1 B:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9pB2 B:342-526 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pC3 C:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pC1 C:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9pC2 C:342-525 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pD3 D:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e4k9pD1 D:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e4k9pD2 D:342-525 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e4k9pD1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4k9pB3 D:x,y,z->B:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9pC1 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e4k9pC3 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9pD3 D:X-1,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e4k9pA3 D:-X+1/2,-Y,Z-1/2->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol