Domain ID e4kccA1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001521274
Type: Automatic domain
Parent: e1pb7A3
Range: A:3-143,A:249-290
Ligands: PO4
PDB: 4kcc
PDB Description: Glutamate receptor ionotropic, NMDA 1
UniProt: P35439
Hsap BLAST neighbor: Q05586
Species: Rattus norvegicus

Structure of domain e4kccA1

Structural contacts of domain e4kccA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kccA2 A:x,y,z->A:-X+1,Y,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA1 A:x,y,z->A:-X+1,Y,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA2 A:-X+1,Y,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA1 A:-X+1,Y,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA1 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA1 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA2 A:x,y,z->A:X-1/2,Y+1/2,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA1 A:x,y,z->A:-X+1,Y,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA1 A:-X+1,Y,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kccA2 A:-X+1/2,Y-1/2,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol