ECOD: domain e4kd5D2

Domain ID e4kd5D2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_11

UID:	001521287
Type:	Automatic domain
Parent:	e1amfA3
Range:	D:124-229
Ligands:	SO4
PDB:	4kd5
PDB Description:	ABC-type transport system, molybdenum-specific extracellular solute-binding protein
UniProt:	Q18A64
Species:

Domain
In chain context
In PDB context

Structure of domain e4kd5D2

Domains in the same chain:

Download Pymol

e4kd5D1	D:43-123,D:230-269	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5D2	D:124-229	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e4kd5A1	A:42-123,A:230-270	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5A2	A:124-229	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5B1	B:42-123,B:230-269	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5B2	B:124-229	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5C1	C:42-123,C:230-270	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5C2	C:124-229	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5D1	D:43-123,D:230-269	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4kd5D2	D:124-229	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e4kd5D2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4kd5A1	D:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e4kd5B2	D:x,y,z->B:-X+3/2,Y-1/2,-Z+1/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e4kd5C1	D:x,y,z->C:-X+3/2,Y-1/2,-Z+1/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e4kd5C2	D:x,y,z->C:-X+3/2,Y-1/2,-Z+1/2	Periplasmic binding protein-like II	Interaction Interface Pymol
e4kd5A2	D:-X+3/2,-Y+1/2,Z-1/2->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol