Domain ID e4kfdD1

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  • A: beta sandwiches
  • X: Glycosyl hydrolase domain-like
  • H: supersandwich
  • T: supersandwich
  • F: Cu_amine_oxid
UID: 001096645
Type: Automatic domain
Parent: e1d6zA1
Range: D:237-672
Ligands: CU GOL PEO
PDB: 4kfd
PDB Description: PEROXISOMAL PRIMARY AMINE OXIDASE
UniProt: P12807
Hsap BLAST neighbor: P19801
Species: Ogataea angusta

Structure of domain e4kfdD1

Domains in the same chain:

e4kfdD2 D:18-115 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdD3 D:116-236 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdD1 D:237-672 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e4kfdA2 A:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdA3 A:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdA1 A:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfdB2 B:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdB3 B:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdB1 B:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfdC2 C:18-115 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdC3 C:116-236 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdC1 C:237-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfdD2 D:18-115 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdD3 D:116-236 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdD1 D:237-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfdE2 E:18-115 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdE3 E:116-236 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdE1 E:237-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfdF2 F:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdF3 F:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfdF1 F:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e4kfdD1 of H-group "supersandwich":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kfdC3 D:x,y,z->C:X,Y,Z Amine oxidase N-terminal region Interaction Interface Pymol
e4kfdC1 D:x,y,z->C:X,Y,Z supersandwich Interaction Interface Pymol
e4kfdE3 D:X,Y,Z->E:x,y,z Amine oxidase N-terminal region Interaction Interface Pymol
e4kfdE1 D:-X,Y-1/2,-Z+1->E:x,y,z supersandwich Interaction Interface Pymol
e4kfdF1 D:X,Y,Z->F:x,y,z supersandwich Interaction Interface Pymol
e4kfdB1 D:x,y,z->B:X,Y,Z supersandwich Interaction Interface Pymol
e4kfdB1 D:X,Y,Z-1->B:x,y,z supersandwich Interaction Interface Pymol