Domain ID e4kfeD1

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  • A: beta sandwiches
  • X: Glycosyl hydrolase domain-like
  • H: supersandwich
  • T: supersandwich
  • F: Cu_amine_oxid
UID: 001096660
Type: Automatic domain
Parent: e1d6zA1
Range: D:222-672
Ligands: CU FOR GOL PEO
PDB: 4kfe
PDB Description: PEROXISOMAL PRIMARY AMINE OXIDASE
UniProt: P12807
Hsap BLAST neighbor: P19801
Species: Ogataea angusta

Structure of domain e4kfeD1

Domains in the same chain:

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e4kfeD2 D:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeD3 D:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeD1 D:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e4kfeA2 A:15-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeA3 A:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeA1 A:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfeB2 B:15-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeB3 B:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeB1 B:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfeC2 C:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeC3 C:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeC1 C:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfeD2 D:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeD3 D:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeD1 D:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfeE2 E:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeE3 E:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeE1 E:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich
e4kfeF2 F:17-100 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeF3 F:101-221 Cystatin-like Amine oxidase N-terminal region Amine oxidase N-terminal region
e4kfeF1 F:222-672 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e4kfeD1 of H-group "supersandwich":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kfeC1 D:x,y,z->C:X,Y,Z supersandwich Interaction Interface Pymol
e4kfeC3 D:x,y,z->C:X,Y,Z Amine oxidase N-terminal region Interaction Interface Pymol
e4kfeE3 D:X,Y,Z->E:x,y,z Amine oxidase N-terminal region Interaction Interface Pymol
e4kfeE1 D:-X,Y-1/2,-Z+1->E:x,y,z supersandwich Interaction Interface Pymol
e4kfeB1 D:x,y,z->B:X,Y,Z supersandwich Interaction Interface Pymol
e4kfeF1 D:X,Y,Z->F:x,y,z supersandwich Interaction Interface Pymol
e4kfeB2 D:X,Y,Z-1->B:x,y,z Amine oxidase N-terminal region Interaction Interface Pymol
e4kfeB1 D:X,Y,Z-1->B:x,y,z supersandwich Interaction Interface Pymol