ECOD: domain e4kfnB3

Domain ID e4kfnB3

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: NAPRTase

UID:	001791542
Type:	Automatic domain
Parent:	e4ltsB2
Range:	B:162-391
Ligands:	1QR EDO PO4
PDB:	4kfn
PDB Description:	Nicotinamide phosphoribosyltransferase
UniProt:	P43490
Hsap BLAST neighbor:	P43490
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4kfnB3

Domains in the same chain:

Download Pymol

e4kfnB2	B:8-161,B:392-427	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Nicotinate/Quinolinate PRTase N-terminal domain-like
e4kfnB3	B:162-391	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4kfnB1	B:428-489	Rubredoxin-like	Nicotinate phosphoribosyltransferase C-terminal domain-related	Nicotinate phosphoribosyltransferase C-terminal domain-related

Domains in the same PDB:

e4kfnA1	A:8-161,A:392-427	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Nicotinate/Quinolinate PRTase N-terminal domain-like
e4kfnA3	A:162-391	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4kfnA2	A:428-489	Rubredoxin-like	Nicotinate phosphoribosyltransferase C-terminal domain-related	Nicotinate phosphoribosyltransferase C-terminal domain-related
e4kfnB2	B:8-161,B:392-427	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Nicotinate/Quinolinate PRTase N-terminal domain-like
e4kfnB3	B:162-391	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4kfnB1	B:428-489	Rubredoxin-like	Nicotinate phosphoribosyltransferase C-terminal domain-related	Nicotinate phosphoribosyltransferase C-terminal domain-related

Structural contacts of domain e4kfnB3 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4kfnA1	B:x,y,z->A:X,Y,Z	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Interaction Interface Pymol
e4kfnA3	B:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol
e4kfnA3	B:X,Y,Z-1->A:x,y,z	TIM barrels	Interaction Interface Pymol