Domain ID e4kfqA2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001521295
Type: Automatic domain
Parent: e1pb7A3
Range: A:4-143,A:249-292
Ligands: GOL KFQ SO4
PDB: 4kfq
PDB Description: Glutamate receptor ionotropic, NMDA 1
UniProt: P35439
Hsap BLAST neighbor: Q05586
Species: Rattus norvegicus

Structure of domain e4kfqA2

Structural contacts of domain e4kfqA2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kfqA2 A:x,y,z->A:X-1,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA2 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA1 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqB1 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA2 A:x,y,z->A:-X+2,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA2 A:-X+2,Y-1/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA2 A:x,y,z->A:-X+1,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA1 A:-X+1,Y-1/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqA2 A:-X+1,Y-1/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4kfqB2 A:X-1,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol