| UID: | 001145763 |
|---|---|
| Type: | Manual and representative domain |
| Range: | D:263-358,D:386-460 |
| Ligands: | ZN |
| PDB: | 4kis |
| PDB Description: | Putative integrase [Bacteriophage A118] |
| UniProt: | Q928V6 |
| Species: |
Structure of domain e4kisD2
Domains in the same chain:
| e4kisD1 | D:133-262 | HTH | HTH | tri-helical |
| e4kisD2 | D:263-358,D:386-460 | Rubredoxin-like | Rubredoxin-related | Zinc-nucleated domain of serine integrase |
Domains in the same PDB:
| e4kisA3 | A:134-262 | HTH | HTH | tri-helical |
| e4kisA2 | A:263-460 | Rubredoxin-like | Rubredoxin-related | Zinc-nucleated domain of serine integrase |
| e4kisB1 | B:134-262 | HTH | HTH | tri-helical |
| e4kisB2 | B:263-454 | Rubredoxin-like | Rubredoxin-related | Zinc-nucleated domain of serine integrase |
| e4kisC2 | C:134-262 | HTH | HTH | tri-helical |
| e4kisC3 | C:263-452 | Rubredoxin-like | Rubredoxin-related | Zinc-nucleated domain of serine integrase |
| e4kisD1 | D:133-262 | HTH | HTH | tri-helical |
| e4kisD2 | D:263-358,D:386-460 | Rubredoxin-like | Rubredoxin-related | Zinc-nucleated domain of serine integrase |
Structural contacts of domain e4kisD2 of H-group "Rubredoxin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4kisA2 | D:x,y,z->A:X,Y,Z | Rubredoxin-related | Interaction Interface Pymol |
| e4kisC2 | D:x,y,z->C:X,Y,Z | HTH | Interaction Interface Pymol |
| e4kisC3 | D:Z,X,Y->C:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e4kisA2 | D:x,y,z->A:Z,X,Y | Rubredoxin-related | Interaction Interface Pymol |
| e4kisC3 | D:x,y,z->C:-Z+1/2,-X+1/2,Y-1/2 | Rubredoxin-related | Interaction Interface Pymol |
