Domain ID e4kj3V1

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  • A: beta barrels
  • X: Ribosomal protein L25-like
  • H: Ribosomal protein L25-like
  • T: Ribosomal protein L25-like
  • F: Ribosomal_L25p
UID: 001067216
Type: Automatic domain
Parent: e1dfuP1
Range: V:1-94
PDB: 4kj3
PDB Description:
Species:

Structure of domain e4kj3V1

Domains in the same chain:

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e4kj3V1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like

Domains in the same PDB:

e4kj301 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4kj321 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4kj331 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4kj341 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4kj3C1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kj3C2 C:125-271 SH3 SH3 SH3
e4kj3E1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4kj3F1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4kj3G2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kj3G1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kj3H1 H:1-50 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4kj3I2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4kj3I1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4kj3J1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4kj3K1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4kj3N1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4kj3O1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4kj3R1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4kj3S1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4kj3T1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4kj3U1 U:1-102 SH3 SH3 SH3
e4kj3V1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4kj3W1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4kj3X1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4kj3Y1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4kj3Z1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e4kj3V1 of H-group "Ribosomal protein L25-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dfuP1 V:x,y,z->M:X,Y,Z Ribosomal protein L25-like Interaction Interface Pymol
e4kj3Y1 V:-X,Y-1/2,-Z+1->Y:x,y,z Ribosomal protein L29 (L29p) Interaction Interface Pymol