Domain ID e4kjbW1

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: Ribosomal_L27
UID: 001067447
Type: Automatic domain
Parent: e3j6bR1
Range: W:6-84
PDB: 4kjb
PDB Description:
Hsap BLAST neighbor: Q9P0M9
Species:

Structure of domain e4kjbW1

Domains in the same chain:

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e4kjbW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e4kjb01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4kjb21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4kjb31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4kjb41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4kjbC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kjbC2 C:125-271 SH3 SH3 SH3
e4kjbE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4kjbF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4kjbG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kjbG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kjbH1 H:1-50 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4kjbI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4kjbI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4kjbJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4kjbK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4kjbN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4kjbO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4kjbR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4kjbS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4kjbT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4kjbU1 U:1-102 SH3 SH3 SH3
e4kjbV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4kjbW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4kjbX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4kjbY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4kjbZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e4kjbW1 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kjbO1 W:x,y,z->O:X,Y,Z Ribonuclease H-like Interaction Interface Pymol