ECOD: domain e4kkdB1

Domain ID e4kkdB1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: FMN-binding split barrel 2
F: Trypsin

UID:	001393528
Type:	Automatic domain
Parent:	e1gdnA1
Range:	B:434-717
Ligands:	IMD
PDB:	4kkd
PDB Description:	MANNAN-BINDING LECTIN SERINE PROTEASE 1
UniProt:	P48740
Hsap BLAST neighbor:	O00187
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4kkdB2	B:298-364	EGF-like	EGF-related	Complement control module/SCR domain
e4kkdB3	B:365-433	EGF-like	EGF-related	Complement control module/SCR domain
e4kkdB1	B:434-717	cradle loop barrel	RIFT-related	FMN-binding split barrel 2

Domains in the same PDB:

Structural contacts of domain e4kkdB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4kkdA6	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e4kkdB1	B:x,y,z->B:-X+2,-Y,Z	RIFT-related	Interaction Interface Pymol
e4kkdB1	B:-X+2,-Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4kkdA7	B:x,y,z->A:X-1/2,-Y-1/2,-Z-1	EGF-related	Interaction Interface Pymol
e4kkdA3	B:x,y,z->A:X-1/2,-Y-1/2,-Z-1	EGF-related	Interaction Interface Pymol
e4kkdB1	B:x,y,z->B:X,Y,Z-1	RIFT-related	Interaction Interface Pymol
e4kkdB1	B:X,Y,Z-1->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4kkdB1	B:x,y,z->B:-X+1,-Y,Z	RIFT-related	Interaction Interface Pymol
e4kkdB1	B:-X+1,-Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4kkdA3	B:x,y,z->A:X-1/2,-Y-1/2,-Z	EGF-related	Interaction Interface Pymol

e4kkdA3	A:298-364	EGF-like	EGF-related	Complement control module/SCR domain
e4kkdA7	A:365-433	EGF-like	EGF-related	Complement control module/SCR domain
e4kkdA6	A:434-718	cradle loop barrel	RIFT-related	FMN-binding split barrel 2
e4kkdB2	B:298-364	EGF-like	EGF-related	Complement control module/SCR domain
e4kkdB3	B:365-433	EGF-like	EGF-related	Complement control module/SCR domain
e4kkdB1	B:434-717	cradle loop barrel	RIFT-related	FMN-binding split barrel 2