| UID: | 001177613 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4k8vC2 |
| Range: | A:161-395 |
| Ligands: | ZN |
| PDB: | 4km5 |
| PDB Description: | Cyclic GMP-AMP synthase |
| UniProt: | Q8N884 |
| Hsap BLAST neighbor: | Q8N884 |
| Species: | Homo sapiens |
Structure of domain e4km5A5
Domains in the same chain:
| e4km5A5 | A:161-395 | Nucleotidyltransferase-like | Nucleotidyltransferase | Nucleotidyltransferase |
| e4km5A6 | A:396-522 | HhH/H2TH | SAM/DNA-glycosylase | PAP/OAS1 substrate-binding domain |
Domains in the same PDB:
| e4km5A5 | A:161-395 | Nucleotidyltransferase-like | Nucleotidyltransferase | Nucleotidyltransferase |
| e4km5A6 | A:396-522 | HhH/H2TH | SAM/DNA-glycosylase | PAP/OAS1 substrate-binding domain |
Structural contacts of domain e4km5A5 of H-group "Nucleotidyltransferase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4km5A6 | A:x,y,z->A:-X,-Y+1,Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e4km5A5 | A:x,y,z->A:-X,-Y+1,Z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A6 | A:-X,-Y+1,Z->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e4km5A5 | A:-X,-Y+1,Z->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A5 | A:x,y,z->A:X,Y,Z-1 | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A5 | A:X,Y,Z-1->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A6 | A:X,Y,Z-1->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e4km5A6 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e4km5A5 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A5 | A:X-1/2,-Y+1/2,-Z+1->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A6 | A:x,y,z->A:X-1,Y,Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e4km5A5 | A:x,y,z->A:X-1,Y,Z | Nucleotidyltransferase | Interaction Interface Pymol |
| e4km5A5 | A:X-1,Y,Z->A:x,y,z | Nucleotidyltransferase | Interaction Interface Pymol |
