Domain ID e4krmJ1

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: V-set
UID: 001095639
Type: Automatic domain
Parent: e1zvoC1
Range: J:1-124
Ligands: NAG
PDB: 4krm
PDB Description: NANOBODY/VHH DOMAIN 7D12
Hsap BLAST neighbor: A0A0C4DH32
Species: Lama glama

Structure of domain e4krmJ1

Domains in the same chain:

Download Pymol

e4krmJ1 J:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4krmA1 A:307-480 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e4krmB1 B:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4krmC1 C:307-480 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e4krmD1 D:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4krmE1 E:307-480 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e4krmF1 F:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4krmG1 G:307-511 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e4krmH1 H:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4krmI1 I:307-480 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e4krmJ1 J:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4krmK1 K:307-480 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e4krmL1 L:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4krmJ1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4krmI1 J:x,y,z->I:X,Y,Z Leucine-rich repeats Interaction Interface Pymol
e4krmI1 J:x,y,z->G:X,Y,Z Leucine-rich repeats Interaction Interface Pymol
e4krmC1 J:x,y,z->C:X,Y,Z Leucine-rich repeats Interaction Interface Pymol