Domain ID e4kslD1

Download files:
  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ubiquitin
UID: 001019114
Type: Automatic domain
Parent: e1ogwA1
Range: D:-3-67
PDB: 4ksl
PDB Description: Polyubiquitin-C
UniProt: P0CG48
Hsap BLAST neighbor: P0CG48
Species: Homo sapiens

Structure of domain e4kslD1

Domains in the same chain:

e4kslD1 D:-3-67 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslD2 D:68-1069 beta-Grasp Ubiquitin-related Ubiquitin-like

Domains in the same PDB:

e4kslA2 A:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslB2 B:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslC1 C:0-71 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslC2 C:72-1073 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslD1 D:-3-67 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslD2 D:68-1069 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslE2 E:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslF1 F:-3-68 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslF2 F:69-1070 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslG2 G:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslH1 H:-3-67 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslH2 H:68-1069 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslI2 I:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslJ1 J:-3-68 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslJ2 J:69-1070 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslK1 K:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslL1 L:-3-68 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslL2 L:69-1070 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslM2 M:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslN1 N:-3-68 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslN2 N:69-1070 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslO2 O:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslP1 P:-3-67 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslP2 P:68-1069 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslQ2 Q:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslR1 R:-3-68 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslR2 R:69-1070 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslS2 S:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslT1 T:-3-67 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslT2 T:68-1069 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslU2 U:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslV1 V:-3-68 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslV2 V:69-1070 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslW2 W:79-348 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4kslX1 X:-3-67 beta-Grasp Ubiquitin-related Ubiquitin-like
e4kslX2 X:68-1069 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e4kslD1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kslA2 D:x,y,z->A:X,Y,Z Cysteine proteinases Interaction Interface Pymol
e4kslH1 D:X,Y,Z->H:x,y,z Ubiquitin-related Interaction Interface Pymol