Domain ID e4ktrH2

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  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: alpha/alpha toroid
  • T: alpha/alpha toroid
  • F: Glyco_hydro_65m
UID: 001499887
Type: Automatic domain
Parent: e4ktpA2
Range: H:249-686
Ligands: GOL IFM PE5 PG4
PDB: 4ktr
PDB Description: Glycoside hydrolase family 65 central catalytic
UniProt: D6XZ22
Hsap BLAST neighbor: Q32M88
Species:

Structure of domain e4ktrH2

Domains in the same chain:

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e4ktrH1 H:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrH2 H:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrH3 H:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related

Domains in the same PDB:

e4ktrA1 A:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrA2 A:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrA3 A:687-762 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrB1 B:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrB2 B:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrB3 B:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrC1 C:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrC2 C:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrC3 C:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrD1 D:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrD2 D:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrD3 D:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrE1 E:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrE2 E:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrE3 E:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrF1 F:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrF2 F:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrF3 F:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrG1 G:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrG2 G:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrG3 G:687-762 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related
e4ktrH1 H:1-248 Glycosyl hydrolase domain-like supersandwich supersandwich
e4ktrH2 H:249-686 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e4ktrH3 H:687-761 Glycosyl hydrolase domain-like Glycoside hydrolase family 127 middle domain-related Glycoside hydrolase family 127 middle domain-related

Structural contacts of domain e4ktrH2 of H-group "alpha/alpha toroid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ktrG2 H:x,y,z->G:X,Y,Z alpha/alpha toroid Interaction Interface Pymol
e4ktrG1 H:x,y,z->G:X-1,Y,Z supersandwich Interaction Interface Pymol
e4ktrG2 H:x,y,z->G:X-1,Y,Z alpha/alpha toroid Interaction Interface Pymol
e4ktrE1 H:x,y,z->E:X,Y,Z supersandwich Interaction Interface Pymol
e4ktrD2 H:-X,Y-1/2,-Z+1->D:x,y,z alpha/alpha toroid Interaction Interface Pymol